Local BLAST Searches
for Ehrlichiae and Related Genomes
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Program:
(Program must match your input and the database you selected. See help for details)


(To select multiple databases, hold down Ctrl and click on databases)

  Databases:
Sequence Information:

  Enter sequence below in FASTA format:
 

 Or load it from disk

 Set subsequence: From         To   

 


The query sequence is filtered for low complexity regions by default.
Filter Low complexity Mask for lookup table only

Expect    Matrix Perform ungapped alignment

Query Genetic Codes (blastx only)

Database Genetic Codes (tblast[nx] only)

Frame shift penalty for blastx

Other advanced options:     


Graphical Overview    Alignment view
Descriptions    Alignments Color schema


 
 
This server runs NCBI BLAST Version 2.2.17 [August 26, 2007].

Created by Sergei Shavirin; Comments and suggestions to: <blast-help@ncbi.nlm.nih.gov>
    Adapted by Mingqun Lin for local blast searches. Last modified: Thursday, October 18, 2007 12:33 PM